Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ZIC3O60481 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.15■□□□□ 0.18
ZIC3O60481 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.15■□□□□ 0.18
ZIC3O60481 AL450487.1-201ENST00000426799 995 ntBASIC16.15■□□□□ 0.18
ZIC3O60481 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 UNC93B7-201ENST00000509439 705 ntBASIC16.15■□□□□ 0.18
ZIC3O60481 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.15■□□□□ 0.18
ZIC3O60481 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.15■□□□□ 0.18
ZIC3O60481 AC091304.2-201ENST00000564639 760 ntBASIC16.15■□□□□ 0.18
ZIC3O60481 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 AL732292.2-201ENST00000609649 430 ntBASIC16.15■□□□□ 0.18
ZIC3O60481 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.15■□□□□ 0.18
ZIC3O60481 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ZIC3O60481 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.15■□□□□ 0.18
ZIC3O60481 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZIC3O60481 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.15■□□□□ 0.18
ZIC3O60481 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ZIC3O60481 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
ZIC3O60481 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ZIC3O60481 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.14■□□□□ 0.18
ZIC3O60481 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.14■□□□□ 0.18
ZIC3O60481 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZIC3O60481 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZIC3O60481 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.14■□□□□ 0.17
ZIC3O60481 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 RCN1P2-201ENST00000398357 915 ntBASIC16.14■□□□□ 0.17
ZIC3O60481 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
ZIC3O60481 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.14■□□□□ 0.17
ZIC3O60481 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.14■□□□□ 0.17
ZIC3O60481 MIR5100-201ENST00000579544 119 ntBASIC16.14■□□□□ 0.17
ZIC3O60481 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ZIC3O60481 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZIC3O60481 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.14■□□□□ 0.17
ZIC3O60481 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ZIC3O60481 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ZIC3O60481 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 KRT18P55-202ENST00000578578 1546 ntBASIC16.14■□□□□ 0.17
ZIC3O60481 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.14■□□□□ 0.17
ZIC3O60481 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZIC3O60481 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
ZIC3O60481 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ZIC3O60481 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.13■□□□□ 0.17
ZIC3O60481 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.13■□□□□ 0.17
ZIC3O60481 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.13■□□□□ 0.17
ZIC3O60481 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.13■□□□□ 0.17
ZIC3O60481 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.13■□□□□ 0.17
ZIC3O60481 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZIC3O60481 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.13■□□□□ 0.17
ZIC3O60481 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.13■□□□□ 0.17
ZIC3O60481 AC096582.2-201ENST00000510860 516 ntBASIC16.13■□□□□ 0.17
ZIC3O60481 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
ZIC3O60481 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms