Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IDH3BO43837 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 UBE2SP1-201ENST00000450587 669 ntBASIC16.54■□□□□ 0.24
IDH3BO43837 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.54■□□□□ 0.24
IDH3BO43837 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 GNAS-203ENST00000306120 1878 ntBASIC16.54■□□□□ 0.24
IDH3BO43837 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
IDH3BO43837 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IDH3BO43837 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 KRT8P7-201ENST00000533003 1432 ntBASIC16.53■□□□□ 0.24
IDH3BO43837 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 ABHD17AP1-201ENST00000358206 933 ntBASIC16.53■□□□□ 0.24
IDH3BO43837 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.53■□□□□ 0.24
IDH3BO43837 RPS2P55-201ENST00000397318 883 ntBASIC16.53■□□□□ 0.24
IDH3BO43837 AC012618.2-201ENST00000428058 849 ntBASIC16.53■□□□□ 0.24
IDH3BO43837 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 AC107956.1-201ENST00000494359 873 ntBASIC16.53■□□□□ 0.24
IDH3BO43837 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.53■□□□□ 0.24
IDH3BO43837 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.53■□□□□ 0.24
IDH3BO43837 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IDH3BO43837 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.53■□□□□ 0.24
IDH3BO43837 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
IDH3BO43837 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
IDH3BO43837 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.53■□□□□ 0.24
IDH3BO43837 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
IDH3BO43837 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
IDH3BO43837 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
IDH3BO43837 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IDH3BO43837 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
IDH3BO43837 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
IDH3BO43837 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.52■□□□□ 0.24
IDH3BO43837 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.52■□□□□ 0.24
IDH3BO43837 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
IDH3BO43837 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 AC142381.4-202ENST00000563973 229 ntBASIC16.52■□□□□ 0.24
IDH3BO43837 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
IDH3BO43837 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
IDH3BO43837 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
IDH3BO43837 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IDH3BO43837 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
IDH3BO43837 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
IDH3BO43837 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
IDH3BO43837 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
IDH3BO43837 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IDH3BO43837 HOXB1-202ENST00000577092 1414 ntBASIC16.52■□□□□ 0.23
IDH3BO43837 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
IDH3BO43837 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
IDH3BO43837 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
IDH3BO43837 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
IDH3BO43837 AC068418.2-201ENST00000577309 3703 ntBASIC16.52■□□□□ 0.23
IDH3BO43837 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
IDH3BO43837 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.51■□□□□ 0.23
IDH3BO43837 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms