Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 AC107890.1-201ENST00000422478 521 ntBASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 ATP5G2P4-201ENST00000442175 420 ntBASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 AC069335.1-201ENST00000489972 472 ntBASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 SLC25A39P2-201ENST00000537614 270 ntBASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 AC026120.1-201ENST00000611536 926 ntBASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 AL353593.2-201ENST00000602529 1483 ntBASIC20.75■□□□□ 0.91
TMEM88BA6NKF7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 CXCL1P1-201ENST00000502804 216 ntBASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 MIR6799-201ENST00000620297 69 ntBASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 AC025048.6-201ENST00000634326 1161 ntBASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 AC112907.3-201ENST00000577781 2400 ntBASIC20.74■□□□□ 0.91
TMEM88BA6NKF7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 AL596325.1-201ENST00000563991 1082 ntBASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 AC092919.2-201ENST00000623631 1645 ntBASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TMEM88BA6NKF7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 FO538757.1-201ENST00000623083 1397 ntBASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 AC132938.5-201ENST00000624980 1813 ntBASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TMEM88BA6NKF7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TMEM88BA6NKF7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms