Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 AC093677.2-201ENST00000600169 1863 ntBASIC18.24■□□□□ 0.51
CAPN8A6NHC0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 RNF126P1-202ENST00000569893 925 ntBASIC18.24■□□□□ 0.51
CAPN8A6NHC0 GPR32P1-201ENST00000601788 811 ntBASIC18.24■□□□□ 0.51
CAPN8A6NHC0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 PHGDH-209ENST00000641074 1780 ntBASIC18.24■□□□□ 0.51
CAPN8A6NHC0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.24■□□□□ 0.51
CAPN8A6NHC0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 AL390719.2-201ENST00000606993 987 ntBASIC18.23■□□□□ 0.51
CAPN8A6NHC0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 AC135776.1-201ENST00000319817 2481 ntBASIC18.23■□□□□ 0.51
CAPN8A6NHC0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CAPN8A6NHC0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 AC005332.3-201ENST00000589904 676 ntBASIC18.22■□□□□ 0.51
CAPN8A6NHC0 AC011498.5-201ENST00000592027 486 ntBASIC18.22■□□□□ 0.51
CAPN8A6NHC0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 Z83836.1-201ENST00000624605 1642 ntBASIC18.22■□□□□ 0.51
CAPN8A6NHC0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CAPN8A6NHC0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CAPN8A6NHC0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms