Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC189A1A4V9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 AP003041.3-201ENST00000527151 707 ntBASIC18.03■□□□□ 0.48
CCDC189A1A4V9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 SDHAP2-201ENST00000455183 2001 ntBASIC18.03■□□□□ 0.48
CCDC189A1A4V9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC189A1A4V9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 KRT18P23-201ENST00000435622 1283 ntBASIC18.02■□□□□ 0.48
CCDC189A1A4V9 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.02■□□□□ 0.48
CCDC189A1A4V9 AC008550.1-201ENST00000511500 884 ntBASIC18.02■□□□□ 0.48
CCDC189A1A4V9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 C2orf69P3-201ENST00000565542 1120 ntBASIC18.02■□□□□ 0.48
CCDC189A1A4V9 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 CR769767.2-201ENST00000622735 460 ntBASIC18.02■□□□□ 0.48
CCDC189A1A4V9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC189A1A4V9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 REXO1L9P-201ENST00000604264 2108 ntBASIC18.02■□□□□ 0.47
CCDC189A1A4V9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC189A1A4V9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 KRT17P2-201ENST00000300992 1314 ntBASIC18.01■□□□□ 0.47
CCDC189A1A4V9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.01■□□□□ 0.47
CCDC189A1A4V9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC189A1A4V9 AC104390.1-201ENST00000555663 520 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms