Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 AC133681.1-201ENST00000465482 601 ntBASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAV9-2A0A087WT02 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 NBPF21P-201ENST00000425093 1451 ntBASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 TSPY26P-202ENST00000565928 3884 ntBASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 AC105020.1-201ENST00000435356 2205 ntBASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAV9-2A0A087WT02 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 AL353807.1-201ENST00000427475 662 ntBASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms