Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 AC012317.2-201ENST00000623305 2251 ntBASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DDX49Q9Y6V7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 SPDYE15P-201ENST00000424157 909 ntBASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 SLC25A6P5-201ENST00000435663 894 ntBASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 AC093458.2-201ENST00000623150 629 ntBASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 AC093677.2-201ENST00000600169 1863 ntBASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.62■■□□□ 1.05
DDX49Q9Y6V7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 AC005332.1-201ENST00000577698 1310 ntBASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 AC083849.1-201ENST00000615227 514 ntBASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 HYMAI.1-201ENST00000620949 238 ntBASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 CR769767.2-201ENST00000622735 460 ntBASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 AP000550.4-202ENST00000639755 178 ntBASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX49Q9Y6V7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 GPAT2P1-201ENST00000444924 1672 ntBASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 MTMR9LP-203ENST00000426597 1545 ntBASIC21.6■■□□□ 1.05
DDX49Q9Y6V7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms