Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.06■□□□□ 0.32
GPC6Q9Y625 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.06■□□□□ 0.32
GPC6Q9Y625 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GPC6Q9Y625 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 AC007663.1-201ENST00000438948 1240 ntBASIC17.05■□□□□ 0.32
GPC6Q9Y625 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 AL096828.2-201ENST00000567259 1965 ntBASIC17.05■□□□□ 0.32
GPC6Q9Y625 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 AL163051.1-201ENST00000569214 1512 ntBASIC17.05■□□□□ 0.32
GPC6Q9Y625 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GPC6Q9Y625 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
GPC6Q9Y625 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 HOXB1-202ENST00000577092 1414 ntBASIC17.04■□□□□ 0.32
GPC6Q9Y625 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 SDHAP2-201ENST00000455183 2001 ntBASIC17.04■□□□□ 0.32
GPC6Q9Y625 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.04■□□□□ 0.32
GPC6Q9Y625 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 AP003041.3-201ENST00000527151 707 ntBASIC17.04■□□□□ 0.32
GPC6Q9Y625 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 PHGDH-209ENST00000641074 1780 ntBASIC17.04■□□□□ 0.32
GPC6Q9Y625 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.04■□□□□ 0.32
GPC6Q9Y625 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GPC6Q9Y625 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 LINC01126-201ENST00000623515 1646 ntBASIC17.03■□□□□ 0.32
GPC6Q9Y625 LINC01568-207ENST00000641790 1380 ntBASIC17.03■□□□□ 0.32
GPC6Q9Y625 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms