Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 AC009154.2-201ENST00000621177 724 ntBASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 KRT8P10-201ENST00000450021 1447 ntBASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RAI2Q9Y5P3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 AP000997.3-201ENST00000623333 2250 ntBASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 PRELID1P1-202ENST00000567272 903 ntBASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 MIR3652-201ENST00000579335 131 ntBASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 AC138028.4-201ENST00000564984 1845 ntBASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAI2Q9Y5P3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 FLJ13224-201ENST00000313737 1514 ntBASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 TSSC2-201ENST00000450217 709 ntBASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 UNC93B7-201ENST00000509439 705 ntBASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 GUSBP12-201ENST00000513727 720 ntBASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 AC090616.6-201ENST00000582640 721 ntBASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 IGHV3-41-201ENST00000613121 348 ntBASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.19■□□□□ 0.5
RAI2Q9Y5P3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAI2Q9Y5P3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms