Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 ATP5G2P1-201ENST00000433580 426 ntBASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MTCL1P1-201ENST00000446207 792 ntBASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MIR3180-1-201ENST00000580374 94 ntBASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MIR3180-3-201ENST00000584616 94 ntBASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHGC4Q9Y5F7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 AL845331.1-201ENST00000424978 1190 ntBASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 TPSP2-201ENST00000561760 610 ntBASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHGC4Q9Y5F7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
PCDHGC4Q9Y5F7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PCDHGC4Q9Y5F7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
PCDHGC4Q9Y5F7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.14■□□□□ 0.5
PCDHGC4Q9Y5F7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGC4Q9Y5F7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGC4Q9Y5F7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHGC4Q9Y5F7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 FLJ13224-201ENST00000313737 1514 ntBASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 AC100803.2-201ENST00000562459 1963 ntBASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 AC112698.1-201ENST00000510299 916 ntBASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 AC092329.2-201ENST00000598402 547 ntBASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHGC4Q9Y5F7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms