Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 AC100791.3-201ENST00000617619 330 ntBASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 AC106886.4-201ENST00000623557 2502 ntBASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UBQLN2Q9UHD9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 AL589743.5-201ENST00000616611 1050 ntBASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 AGGF1P2-201ENST00000426656 2106 ntBASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.23■□□□□ 0.03
UBQLN2Q9UHD9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 DUSP5P2-201ENST00000426873 1033 ntBASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 AC069152.1-201ENST00000438030 544 ntBASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 AC133041.1-202ENST00000642053 222 ntBASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 AC087633.2-202ENST00000565166 1439 ntBASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 AC006116.8-202ENST00000587620 1550 ntBASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
UBQLN2Q9UHD9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 AC023824.1-201ENST00000562945 2975 ntBASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBQLN2Q9UHD9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms