Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 AL138831.2-201ENST00000606564 490 ntBASIC16.9■□□□□ 0.3
CTSFQ9UBX1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.9■□□□□ 0.3
CTSFQ9UBX1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CTSFQ9UBX1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.89■□□□□ 0.3
CTSFQ9UBX1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTSFQ9UBX1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CTSFQ9UBX1 AL096828.2-201ENST00000567259 1965 ntBASIC16.89■□□□□ 0.3
CTSFQ9UBX1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CTSFQ9UBX1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 AC135776.1-201ENST00000319817 2481 ntBASIC16.89■□□□□ 0.29
CTSFQ9UBX1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 RCN1P2-201ENST00000398357 915 ntBASIC16.89■□□□□ 0.29
CTSFQ9UBX1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 MIR5100-201ENST00000579544 119 ntBASIC16.89■□□□□ 0.29
CTSFQ9UBX1 AL591684.3-201ENST00000605187 298 ntBASIC16.89■□□□□ 0.29
CTSFQ9UBX1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
CTSFQ9UBX1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 AC093677.2-201ENST00000600169 1863 ntBASIC16.88■□□□□ 0.29
CTSFQ9UBX1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 AC125634.1-201ENST00000438758 1403 ntBASIC16.88■□□□□ 0.29
CTSFQ9UBX1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.88■□□□□ 0.29
CTSFQ9UBX1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms