Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 AC010327.4-202ENST00000591484 748 ntBASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HCFC1R1Q9NWW0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 AC093010.1-201ENST00000473625 1624 ntBASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 LAGE3P1-201ENST00000425356 484 ntBASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 AL591424.1-201ENST00000442569 1213 ntBASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 AL691403.2-201ENST00000618460 490 ntBASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 AD001527.2-201ENST00000622994 785 ntBASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HCFC1R1Q9NWW0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 CROCCP3-202ENST00000420820 1947 ntBASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 AL139424.1-201ENST00000607572 797 ntBASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 AL022326.1-202ENST00000641533 845 ntBASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.59■□□□□ 0.57
HCFC1R1Q9NWW0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCFC1R1Q9NWW0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 AC009947.1-201ENST00000444350 727 ntBASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 AC122714.2-201ENST00000502787 707 ntBASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.58■□□□□ 0.56
HCFC1R1Q9NWW0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms