Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 DNAJB3-202ENST00000449667 1266 ntBASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 AC011467.2-201ENST00000598425 242 ntBASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDLIM7Q9NR12 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 AC090164.3-201ENST00000610780 2143 ntBASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 AC004832.2-201ENST00000426397 482 ntBASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 AL138831.2-201ENST00000606564 490 ntBASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 AC008735.5-201ENST00000623544 497 ntBASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 AC009113.1-201ENST00000570267 2443 ntBASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PDLIM7Q9NR12 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 AL356309.3-201ENST00000624132 1934 ntBASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 ABCD1P5-201ENST00000445663 754 ntBASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 RNA5SP416-201ENST00000516838 111 ntBASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 AC009154.2-201ENST00000621177 724 ntBASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 AC135776.1-201ENST00000319817 2481 ntBASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDLIM7Q9NR12 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 UNC93B6-202ENST00000528242 690 ntBASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.03■□□□□ 0.8
PDLIM7Q9NR12 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms