Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 AGGF1P2-201ENST00000426656 2106 ntBASIC17.85■□□□□ 0.45
SSU72Q9NP77 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 AC016396.2-201ENST00000562575 1417 ntBASIC17.85■□□□□ 0.45
SSU72Q9NP77 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 AC008687.5-201ENST00000593746 558 ntBASIC17.85■□□□□ 0.45
SSU72Q9NP77 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 CR769767.2-201ENST00000622735 460 ntBASIC17.85■□□□□ 0.45
SSU72Q9NP77 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 AC073648.6-201ENST00000641589 218 ntBASIC17.85■□□□□ 0.45
SSU72Q9NP77 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SSU72Q9NP77 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSU72Q9NP77 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 LINC00167-201ENST00000530583 1419 ntBASIC17.84■□□□□ 0.45
SSU72Q9NP77 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 AC097488.1-201ENST00000507834 756 ntBASIC17.84■□□□□ 0.45
SSU72Q9NP77 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 AC112497.1-201ENST00000624824 639 ntBASIC17.84■□□□□ 0.45
SSU72Q9NP77 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.84■□□□□ 0.45
SSU72Q9NP77 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSU72Q9NP77 AC106886.4-201ENST00000623557 2502 ntBASIC17.83■□□□□ 0.45
SSU72Q9NP77 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SSU72Q9NP77 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SSU72Q9NP77 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSU72Q9NP77 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSU72Q9NP77 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.83■□□□□ 0.45
SSU72Q9NP77 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.83■□□□□ 0.45
SSU72Q9NP77 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 AL355802.2-201ENST00000402069 882 ntBASIC17.83■□□□□ 0.44
SSU72Q9NP77 DDX43P3-201ENST00000441064 443 ntBASIC17.83■□□□□ 0.44
SSU72Q9NP77 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSU72Q9NP77 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.83■□□□□ 0.44
SSU72Q9NP77 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms