Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH2D4AQ9H788 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
SH2D4AQ9H788 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH2D4AQ9H788 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 AC132938.6-201ENST00000623828 1655 ntBASIC20.93■□□□□ 0.94
SH2D4AQ9H788 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 ABCD1P5-201ENST00000445663 754 ntBASIC20.93■□□□□ 0.94
SH2D4AQ9H788 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.93■□□□□ 0.94
SH2D4AQ9H788 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 AL138781.2-201ENST00000617896 1843 ntBASIC20.92■□□□□ 0.94
SH2D4AQ9H788 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 FAM220CP-201ENST00000395253 831 ntBASIC20.92■□□□□ 0.94
SH2D4AQ9H788 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 AL031284.1-201ENST00000419297 478 ntBASIC20.92■□□□□ 0.94
SH2D4AQ9H788 AL590627.1-203ENST00000421194 1026 ntBASIC20.92■□□□□ 0.94
SH2D4AQ9H788 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 AC120114.3-201ENST00000611923 658 ntBASIC20.92■□□□□ 0.94
SH2D4AQ9H788 AC097374.2-201ENST00000618617 1306 ntBASIC20.92■□□□□ 0.94
SH2D4AQ9H788 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 CROCCP3-202ENST00000420820 1947 ntBASIC20.92■□□□□ 0.94
SH2D4AQ9H788 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH2D4AQ9H788 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.91■□□□□ 0.94
SH2D4AQ9H788 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH2D4AQ9H788 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH2D4AQ9H788 AC093010.1-201ENST00000473625 1624 ntBASIC20.9■□□□□ 0.94
SH2D4AQ9H788 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms