Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP4-1Q9BYQ7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP4-1Q9BYQ7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP4-1Q9BYQ7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
KRTAP4-1Q9BYQ7 PHGDH-209ENST00000641074 1780 ntBASIC9.27□□□□□ -0.92
KRTAP4-1Q9BYQ7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 CALY-203ENST00000368558 825 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 VN2R19P-201ENST00000442399 1052 ntBASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 GMCL1P1-201ENST00000463439 1581 ntBASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL049757.1-201ENST00000616842 1596 ntBASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
KRTAP4-1Q9BYQ7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL139400.1-201ENST00000366220 510 ntBASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CRYGEP-201ENST00000412192 528 ntBASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 ATP6V0CP3-201ENST00000417255 467 ntBASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CNN2P11-201ENST00000429351 262 ntBASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 SNHG9-202ENST00000564014 471 ntBASIC9.26□□□□□ -0.93
KRTAP4-1Q9BYQ7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms