Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCM2Q9BSQ5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CCM2Q9BSQ5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCM2Q9BSQ5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 RN7SL606P-201ENST00000472779 293 ntBASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 AC068472.1-201ENST00000474589 881 ntBASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 AC124864.1-201ENST00000623408 392 ntBASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 AC018470.1-201ENST00000624790 3129 ntBASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 AP000997.3-201ENST00000623333 2250 ntBASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCM2Q9BSQ5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 ATP5G2P1-201ENST00000433580 426 ntBASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 AL592071.1-201ENST00000611956 408 ntBASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCM2Q9BSQ5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCM2Q9BSQ5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms