Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.73■□□□□ 0.27
TM9SF2Q99805 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF2Q99805 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 AP000550.4-202ENST00000639755 178 ntBASIC16.72■□□□□ 0.27
TM9SF2Q99805 AC099398.1-201ENST00000567919 2776 ntBASIC16.72■□□□□ 0.27
TM9SF2Q99805 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF2Q99805 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF2Q99805 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
TM9SF2Q99805 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 AL109659.2-201ENST00000606809 1674 ntBASIC16.71■□□□□ 0.27
TM9SF2Q99805 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF2Q99805 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TM9SF2Q99805 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms