Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.39□□□□□ -0.43
LYSTQ99698 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LYSTQ99698 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC12.39□□□□□ -0.43
LYSTQ99698 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.39□□□□□ -0.43
LYSTQ99698 OR7E47P-204ENST00000575924 449 ntBASIC12.39□□□□□ -0.43
LYSTQ99698 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
LYSTQ99698 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LYSTQ99698 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 AC108073.2-201ENST00000464002 357 ntBASIC12.38□□□□□ -0.43
LYSTQ99698 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.38□□□□□ -0.43
LYSTQ99698 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.38□□□□□ -0.43
LYSTQ99698 AC079776.2-201ENST00000641154 1609 ntBASIC12.38□□□□□ -0.43
LYSTQ99698 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LYSTQ99698 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LYSTQ99698 AC093520.2-201ENST00000561830 333 ntBASIC12.38□□□□□ -0.43
LYSTQ99698 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.38□□□□□ -0.43
LYSTQ99698 RNF151-202ENST00000569210 853 ntTSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.38□□□□□ -0.43
LYSTQ99698 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
LYSTQ99698 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LYSTQ99698 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.38□□□□□ -0.43
LYSTQ99698 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 AC005332.7-201ENST00000614046 2005 ntBASIC12.38□□□□□ -0.43
LYSTQ99698 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LYSTQ99698 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LYSTQ99698 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LYSTQ99698 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LYSTQ99698 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LYSTQ99698 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC12.38□□□□□ -0.43
LYSTQ99698 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.37□□□□□ -0.43
LYSTQ99698 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 AP000344.2-201ENST00000512987 629 ntBASIC12.37□□□□□ -0.43
LYSTQ99698 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.37□□□□□ -0.43
LYSTQ99698 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 AL513210.1-201ENST00000629608 234 ntBASIC12.37□□□□□ -0.43
LYSTQ99698 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 PMPCAP1-201ENST00000508114 1576 ntBASIC12.37□□□□□ -0.43
LYSTQ99698 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LYSTQ99698 AC116562.4-201ENST00000641316 2276 ntBASIC12.37□□□□□ -0.43
LYSTQ99698 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.37□□□□□ -0.43
LYSTQ99698 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LYSTQ99698 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.37□□□□□ -0.43
LYSTQ99698 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.37□□□□□ -0.43
LYSTQ99698 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
LYSTQ99698 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC12.37□□□□□ -0.43
LYSTQ99698 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LYSTQ99698 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LYSTQ99698 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LYSTQ99698 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LYSTQ99698 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.36□□□□□ -0.43
LYSTQ99698 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC12.36□□□□□ -0.43
LYSTQ99698 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
LYSTQ99698 PMS2P4-201ENST00000412466 1052 ntBASIC12.36□□□□□ -0.43
LYSTQ99698 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.36□□□□□ -0.43
LYSTQ99698 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.36□□□□□ -0.43
LYSTQ99698 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LYSTQ99698 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LYSTQ99698 AC022145.2-201ENST00000598203 171 ntBASIC12.36□□□□□ -0.43
LYSTQ99698 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.36□□□□□ -0.43
LYSTQ99698 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.36□□□□□ -0.43
LYSTQ99698 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LYSTQ99698 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
LYSTQ99698 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
LYSTQ99698 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LYSTQ99698 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.36□□□□□ -0.43
LYSTQ99698 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LYSTQ99698 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
LYSTQ99698 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms