Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 MCCD1P2-201ENST00000423228 335 ntBASIC15.81■□□□□ 0.12
PCNX1Q96RV3 LAGE3P1-201ENST00000425356 484 ntBASIC15.81■□□□□ 0.12
PCNX1Q96RV3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 AC097374.2-201ENST00000618617 1306 ntBASIC15.81■□□□□ 0.12
PCNX1Q96RV3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCNX1Q96RV3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 MIR3197-201ENST00000582241 73 ntBASIC15.8■□□□□ 0.12
PCNX1Q96RV3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 AC107918.4-202ENST00000641623 219 ntBASIC15.8■□□□□ 0.12
PCNX1Q96RV3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 AC079776.2-201ENST00000641154 1609 ntBASIC15.8■□□□□ 0.12
PCNX1Q96RV3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 GPX1P2-201ENST00000429271 606 ntBASIC15.8■□□□□ 0.12
PCNX1Q96RV3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 AC009533.2-201ENST00000543664 586 ntBASIC15.8■□□□□ 0.12
PCNX1Q96RV3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCNX1Q96RV3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 KRT18P27-201ENST00000427733 1299 ntBASIC15.79■□□□□ 0.12
PCNX1Q96RV3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 AC010460.3-201ENST00000511359 1579 ntBASIC15.79■□□□□ 0.12
PCNX1Q96RV3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 ANO7L1-203ENST00000602586 1720 ntBASIC15.79■□□□□ 0.12
PCNX1Q96RV3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCNX1Q96RV3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCNX1Q96RV3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCNX1Q96RV3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCNX1Q96RV3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.78■□□□□ 0.12
PCNX1Q96RV3 AC108751.1-201ENST00000490852 363 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms