Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 AC012615.1-201ENST00000565797 1299 ntBASIC14.01□□□□□ -0.17
DUX3Q96PT4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 IFNL4P1-201ENST00000607083 540 ntBASIC14.01□□□□□ -0.17
DUX3Q96PT4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 AL024508.2-201ENST00000607749 1894 ntBASIC14.01□□□□□ -0.17
DUX3Q96PT4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX3Q96PT4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.01□□□□□ -0.17
DUX3Q96PT4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14□□□□□ -0.17
DUX3Q96PT4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
DUX3Q96PT4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14□□□□□ -0.17
DUX3Q96PT4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14□□□□□ -0.17
DUX3Q96PT4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14□□□□□ -0.17
DUX3Q96PT4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 AC111152.3-201ENST00000569699 673 ntBASIC14□□□□□ -0.17
DUX3Q96PT4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14□□□□□ -0.17
DUX3Q96PT4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14□□□□□ -0.17
DUX3Q96PT4 Z69720.1-201ENST00000601483 472 ntBASIC14□□□□□ -0.17
DUX3Q96PT4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
DUX3Q96PT4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 LINC01126-201ENST00000623515 1646 ntBASIC14□□□□□ -0.17
DUX3Q96PT4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14□□□□□ -0.17
DUX3Q96PT4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX3Q96PT4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 LETM1P2-201ENST00000597330 2178 ntBASIC13.99□□□□□ -0.17
DUX3Q96PT4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 LINC00602-201ENST00000629776 2065 ntBASIC13.99□□□□□ -0.17
DUX3Q96PT4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 AC004408.2-201ENST00000623613 2777 ntBASIC13.99□□□□□ -0.17
DUX3Q96PT4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX3Q96PT4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 NUS1P2-201ENST00000417358 873 ntBASIC13.99□□□□□ -0.17
DUX3Q96PT4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 KRT17P6-201ENST00000453795 1220 ntBASIC13.99□□□□□ -0.17
DUX3Q96PT4 RN7SL606P-201ENST00000472779 293 ntBASIC13.99□□□□□ -0.17
DUX3Q96PT4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX3Q96PT4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms