Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.71■□□□□ 0.27
CT55Q8WUE5 AC105339.3-201ENST00000560043 636 ntBASIC16.71■□□□□ 0.27
CT55Q8WUE5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CT55Q8WUE5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CT55Q8WUE5 AC107918.4-202ENST00000641623 219 ntBASIC16.71■□□□□ 0.27
CT55Q8WUE5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CT55Q8WUE5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CT55Q8WUE5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CT55Q8WUE5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.71■□□□□ 0.27
CT55Q8WUE5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.71■□□□□ 0.27
CT55Q8WUE5 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CT55Q8WUE5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CT55Q8WUE5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CT55Q8WUE5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 MIR1233-2-201ENST00000408138 82 ntBASIC16.7■□□□□ 0.26
CT55Q8WUE5 MIR1233-1-201ENST00000408722 82 ntBASIC16.7■□□□□ 0.26
CT55Q8WUE5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 RNA5SP415-201ENST00000517246 115 ntBASIC16.7■□□□□ 0.26
CT55Q8WUE5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 AC027601.4-201ENST00000611259 610 ntBASIC16.7■□□□□ 0.26
CT55Q8WUE5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 AC079776.2-201ENST00000641154 1609 ntBASIC16.7■□□□□ 0.26
CT55Q8WUE5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
CT55Q8WUE5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CT55Q8WUE5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 AP002414.3-201ENST00000589352 1468 ntBASIC16.69■□□□□ 0.26
CT55Q8WUE5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 MED15P5-201ENST00000423150 992 ntBASIC16.69■□□□□ 0.26
CT55Q8WUE5 AC122714.2-201ENST00000502787 707 ntBASIC16.69■□□□□ 0.26
CT55Q8WUE5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 AC034105.1-201ENST00000563488 319 ntBASIC16.69■□□□□ 0.26
CT55Q8WUE5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 AC140113.2-201ENST00000604370 208 ntBASIC16.69■□□□□ 0.26
CT55Q8WUE5 Z83851.2-201ENST00000609564 659 ntBASIC16.69■□□□□ 0.26
CT55Q8WUE5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CT55Q8WUE5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.69■□□□□ 0.26
CT55Q8WUE5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 PMPCAP1-201ENST00000508114 1576 ntBASIC16.68■□□□□ 0.26
CT55Q8WUE5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 LAGE3P1-201ENST00000425356 484 ntBASIC16.68■□□□□ 0.26
CT55Q8WUE5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 AL356488.2-201ENST00000602755 427 ntBASIC16.68■□□□□ 0.26
CT55Q8WUE5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.68■□□□□ 0.26
CT55Q8WUE5 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CT55Q8WUE5 CROCCP3-202ENST00000420820 1947 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms