Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 VENTXP5-201ENST00000523979 775 ntBASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 AC087388.1-201ENST00000571370 1112 ntBASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HMGCLL1Q8TB92 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGCLL1Q8TB92 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HMGCLL1Q8TB92 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HMGCLL1Q8TB92 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
HMGCLL1Q8TB92 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGCLL1Q8TB92 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
HMGCLL1Q8TB92 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
HMGCLL1Q8TB92 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 KRT18P48-201ENST00000434763 852 ntBASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 FAM86EP-206ENST00000510506 987 ntBASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGCLL1Q8TB92 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 AC141586.5-201ENST00000624546 2050 ntBASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGCLL1Q8TB92 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms