Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 PCDHA12-202ENST00000613593 2588 ntBASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 ATP5G1P1-201ENST00000448724 379 ntBASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 AC005363.2-201ENST00000618631 242 ntBASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 AL645608.8-201ENST00000606034 2086 ntBASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CFAP61Q8NHU2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 MIR564-202ENST00000385049 94 ntBASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AC097493.4-201ENST00000641197 219 ntBASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 AC084018.2-201ENST00000613093 2607 ntBASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CFAP61Q8NHU2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 AC012306.2-201ENST00000609350 630 ntBASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CFAP61Q8NHU2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP61Q8NHU2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP61Q8NHU2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.22■□□□□ 0.51
CFAP61Q8NHU2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP61Q8NHU2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CFAP61Q8NHU2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms