Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 KRT18P3-201ENST00000451602 1288 ntBASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 RNA5SP415-201ENST00000517246 115 ntBASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 AC105339.3-201ENST00000560043 636 ntBASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 AC040169.1-201ENST00000565382 521 ntBASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.25■□□□□ 0.51
SYNPOQ8N3V7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 MIR3687-2-201ENST00000577708 61 ntBASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 MIR3687-1-201ENST00000614492 61 ntBASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 AC107918.4-202ENST00000641623 219 ntBASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 AC079781.4-201ENST00000641908 219 ntBASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SYNPOQ8N3V7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SYNPOQ8N3V7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SYNPOQ8N3V7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms