Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 TSPY19P-201ENST00000418461 509 ntBASIC18.68■□□□□ 0.58
SCML4Q8N228 TSPY18P-201ENST00000441642 509 ntBASIC18.68■□□□□ 0.58
SCML4Q8N228 KRT16P4-201ENST00000453883 522 ntBASIC18.68■□□□□ 0.58
SCML4Q8N228 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.68■□□□□ 0.58
SCML4Q8N228 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.68■□□□□ 0.58
SCML4Q8N228 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.68■□□□□ 0.58
SCML4Q8N228 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.68■□□□□ 0.58
SCML4Q8N228 AC099336.1-202ENST00000602961 463 ntBASIC18.68■□□□□ 0.58
SCML4Q8N228 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.68■□□□□ 0.58
SCML4Q8N228 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.68■□□□□ 0.58
SCML4Q8N228 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCML4Q8N228 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.68■□□□□ 0.58
SCML4Q8N228 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCML4Q8N228 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SCML4Q8N228 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.68■□□□□ 0.58
SCML4Q8N228 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SCML4Q8N228 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.68■□□□□ 0.58
SCML4Q8N228 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCML4Q8N228 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.68■□□□□ 0.58
SCML4Q8N228 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SCML4Q8N228 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.67■□□□□ 0.58
SCML4Q8N228 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SCML4Q8N228 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 TP73-AS1-210ENST00000637775 1455 ntBASIC18.67■□□□□ 0.58
SCML4Q8N228 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.67■□□□□ 0.58
SCML4Q8N228 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.67■□□□□ 0.58
SCML4Q8N228 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
SCML4Q8N228 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 AC007967.3-201ENST00000434308 558 ntBASIC18.67■□□□□ 0.58
SCML4Q8N228 DUSP5P1-201ENST00000441325 1139 ntBASIC18.67■□□□□ 0.58
SCML4Q8N228 AC122714.2-201ENST00000502787 707 ntBASIC18.67■□□□□ 0.58
SCML4Q8N228 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.67■□□□□ 0.58
SCML4Q8N228 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.67■□□□□ 0.58
SCML4Q8N228 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SCML4Q8N228 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SCML4Q8N228 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SCML4Q8N228 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SCML4Q8N228 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.66■□□□□ 0.58
SCML4Q8N228 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
SCML4Q8N228 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.66■□□□□ 0.58
SCML4Q8N228 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 COX5BP2-201ENST00000392354 334 ntBASIC18.66■□□□□ 0.58
SCML4Q8N228 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.66■□□□□ 0.58
SCML4Q8N228 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.66■□□□□ 0.58
SCML4Q8N228 PRELID1P1-202ENST00000567272 903 ntBASIC18.66■□□□□ 0.58
SCML4Q8N228 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.66■□□□□ 0.58
SCML4Q8N228 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 AL121772.3-201ENST00000610840 674 ntBASIC18.66■□□□□ 0.58
SCML4Q8N228 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 INTS4P1-201ENST00000438455 1935 ntBASIC18.66■□□□□ 0.58
SCML4Q8N228 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.66■□□□□ 0.58
SCML4Q8N228 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.66■□□□□ 0.58
SCML4Q8N228 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SCML4Q8N228 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SCML4Q8N228 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms