Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
LRRTM4Q86VH4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LRRTM4Q86VH4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRTM4Q86VH4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.64■□□□□ 0.42
LRRTM4Q86VH4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRTM4Q86VH4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
LRRTM4Q86VH4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
LRRTM4Q86VH4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LRRTM4Q86VH4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 AC005336.2-201ENST00000593183 939 ntBASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LRRTM4Q86VH4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 BICD1-207ENST00000551848 1962 ntBASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRTM4Q86VH4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 FOSL1P1-201ENST00000511041 816 ntBASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 AC138894.3-201ENST00000603787 634 ntBASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 AL121772.3-201ENST00000610840 674 ntBASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRTM4Q86VH4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms