Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 ABHD17AP1-201ENST00000358206 933 ntBASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 MIR564-202ENST00000385049 94 ntBASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTCHD4Q6ZW05 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PTCHD4Q6ZW05 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 UBE2SP1-201ENST00000450587 669 ntBASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 AC097488.1-201ENST00000507834 756 ntBASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 REXO1L10P-201ENST00000615707 1290 ntBASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 REXO1L12P-201ENST00000622156 912 ntBASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTCHD4Q6ZW05 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 KRT18P55-202ENST00000578578 1546 ntBASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 AC012618.2-201ENST00000428058 849 ntBASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 MCCD1P1-208ENST00000445732 328 ntBASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 AC233702.5-201ENST00000584107 538 ntBASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 AL049637.2-201ENST00000641778 930 ntBASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 AC099343.3-201ENST00000605834 2503 ntBASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms