Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.9■□□□□ 0.3
RTL4Q6ZR62 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 AL133373.2-201ENST00000623187 2828 ntBASIC16.9■□□□□ 0.3
RTL4Q6ZR62 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.9■□□□□ 0.3
RTL4Q6ZR62 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RTL4Q6ZR62 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.89■□□□□ 0.3
RTL4Q6ZR62 AL499627.1-201ENST00000569373 2188 ntBASIC16.89■□□□□ 0.3
RTL4Q6ZR62 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.89■□□□□ 0.3
RTL4Q6ZR62 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 AC011498.5-201ENST00000592027 486 ntBASIC16.89■□□□□ 0.29
RTL4Q6ZR62 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RTL4Q6ZR62 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 AC093458.2-201ENST00000623150 629 ntBASIC16.88■□□□□ 0.29
RTL4Q6ZR62 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RTL4Q6ZR62 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 MYLKP1-201ENST00000509077 1580 ntBASIC16.87■□□□□ 0.29
RTL4Q6ZR62 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RTL4Q6ZR62 MIR149-201ENST00000384879 89 ntBASIC16.87■□□□□ 0.29
RTL4Q6ZR62 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms