Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRAMEF17Q5VTA0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 AC004408.2-201ENST00000623613 2777 ntBASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 AC009154.2-201ENST00000621177 724 ntBASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 AC132938.6-201ENST00000623828 1655 ntBASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.13■□□□□ 0.33
PRAMEF17Q5VTA0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 RCN1P2-201ENST00000398357 915 ntBASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 AF238378.1-201ENST00000526806 358 ntBASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 MIR5100-201ENST00000579544 119 ntBASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PRAMEF17Q5VTA0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PRAMEF17Q5VTA0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms