Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 SIRPAP1-201ENST00000448467 1770 ntBASIC18.69■□□□□ 0.58
LRRC38Q5VT99 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 TERF1P1-201ENST00000311003 1181 ntBASIC18.69■□□□□ 0.58
LRRC38Q5VT99 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 DDX43P3-201ENST00000441064 443 ntBASIC18.69■□□□□ 0.58
LRRC38Q5VT99 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 AC009154.2-201ENST00000621177 724 ntBASIC18.69■□□□□ 0.58
LRRC38Q5VT99 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
LRRC38Q5VT99 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.68■□□□□ 0.58
LRRC38Q5VT99 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 AL138688.1-201ENST00000624851 1594 ntBASIC18.68■□□□□ 0.58
LRRC38Q5VT99 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 SPDYE15P-201ENST00000424157 909 ntBASIC18.68■□□□□ 0.58
LRRC38Q5VT99 AL137013.1-201ENST00000432946 1228 ntBASIC18.68■□□□□ 0.58
LRRC38Q5VT99 KRT18P48-201ENST00000434763 852 ntBASIC18.68■□□□□ 0.58
LRRC38Q5VT99 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 AC133561.5-201ENST00000635547 218 ntBASIC18.68■□□□□ 0.58
LRRC38Q5VT99 LINC00304-203ENST00000565008 1864 ntBASIC18.68■□□□□ 0.58
LRRC38Q5VT99 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC38Q5VT99 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 AL645608.8-201ENST00000606034 2086 ntBASIC18.67■□□□□ 0.58
LRRC38Q5VT99 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 FAM8A6P-201ENST00000407496 1135 ntBASIC18.67■□□□□ 0.58
LRRC38Q5VT99 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 YBX1P2-201ENST00000489612 999 ntBASIC18.67■□□□□ 0.58
LRRC38Q5VT99 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC38Q5VT99 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC38Q5VT99 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms