Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.74■□□□□ 0.75
COBLL1Q53SF7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 AC112698.1-201ENST00000510299 916 ntBASIC19.73■□□□□ 0.75
COBLL1Q53SF7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.73■□□□□ 0.75
COBLL1Q53SF7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 AC211429.1-201ENST00000415277 523 ntBASIC19.72■□□□□ 0.75
COBLL1Q53SF7 TSPY12P-201ENST00000421279 868 ntBASIC19.72■□□□□ 0.75
COBLL1Q53SF7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.72■□□□□ 0.75
COBLL1Q53SF7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COBLL1Q53SF7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 AP003733.1-201ENST00000491725 852 ntBASIC19.71■□□□□ 0.75
COBLL1Q53SF7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 GPR32P1-201ENST00000601788 811 ntBASIC19.71■□□□□ 0.75
COBLL1Q53SF7 LINC01023-201ENST00000606054 436 ntBASIC19.71■□□□□ 0.75
COBLL1Q53SF7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
COBLL1Q53SF7 AC139713.2-201ENST00000641328 2723 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms