Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN8P56748 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLDN8P56748 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN8P56748 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.13■□□□□ 0.33
CLDN8P56748 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN8P56748 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.13■□□□□ 0.33
CLDN8P56748 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLDN8P56748 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.13■□□□□ 0.33
CLDN8P56748 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN8P56748 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLDN8P56748 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLDN8P56748 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
CLDN8P56748 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN8P56748 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CLDN8P56748 AL138688.1-201ENST00000624851 1594 ntBASIC17.12■□□□□ 0.33
CLDN8P56748 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CLDN8P56748 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 AP000523.1-201ENST00000398242 1049 ntBASIC17.12■□□□□ 0.33
CLDN8P56748 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.12■□□□□ 0.33
CLDN8P56748 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN8P56748 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 AC113404.2-201ENST00000507884 177 ntBASIC17.12■□□□□ 0.33
CLDN8P56748 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN8P56748 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.12■□□□□ 0.33
CLDN8P56748 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 AL157888.1-201ENST00000631930 593 ntBASIC17.12■□□□□ 0.33
CLDN8P56748 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.12■□□□□ 0.33
CLDN8P56748 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CLDN8P56748 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLDN8P56748 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CLDN8P56748 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN8P56748 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 AL023806.1-201ENST00000603994 1649 ntBASIC17.11■□□□□ 0.33
CLDN8P56748 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN8P56748 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN8P56748 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
CLDN8P56748 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLDN8P56748 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.11■□□□□ 0.33
CLDN8P56748 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN8P56748 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.11■□□□□ 0.33
CLDN8P56748 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 LINC00602-201ENST00000629776 2065 ntBASIC17.11■□□□□ 0.33
CLDN8P56748 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLDN8P56748 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLDN8P56748 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
CLDN8P56748 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
CLDN8P56748 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLDN8P56748 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms