Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 AC022898.2-201ENST00000616822 1312 ntBASIC19.81■□□□□ 0.76
PEX3P56589 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
PEX3P56589 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 KRT18P56-201ENST00000507275 550 ntBASIC19.81■□□□□ 0.76
PEX3P56589 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.81■□□□□ 0.76
PEX3P56589 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.81■□□□□ 0.76
PEX3P56589 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PEX3P56589 AL353801.3-201ENST00000609898 542 ntBASIC19.81■□□□□ 0.76
PEX3P56589 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.81■□□□□ 0.76
PEX3P56589 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PEX3P56589 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PEX3P56589 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
PEX3P56589 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.8■□□□□ 0.76
PEX3P56589 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.8■□□□□ 0.76
PEX3P56589 VENTXP7-201ENST00000475503 772 ntBASIC19.8■□□□□ 0.76
PEX3P56589 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.8■□□□□ 0.76
PEX3P56589 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.8■□□□□ 0.76
PEX3P56589 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.8■□□□□ 0.76
PEX3P56589 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PEX3P56589 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 FLJ13224-201ENST00000313737 1514 ntBASIC19.8■□□□□ 0.76
PEX3P56589 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PEX3P56589 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.8■□□□□ 0.76
PEX3P56589 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PEX3P56589 AC100803.2-201ENST00000562459 1963 ntBASIC19.79■□□□□ 0.76
PEX3P56589 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 AC246785.2-201ENST00000432512 513 ntBASIC19.79■□□□□ 0.76
PEX3P56589 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.79■□□□□ 0.76
PEX3P56589 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PEX3P56589 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms