Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.82■□□□□ 0.76
PEX3P56589 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PEX3P56589 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PEX3P56589 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 AC022898.2-201ENST00000616822 1312 ntBASIC19.81■□□□□ 0.76
PEX3P56589 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
PEX3P56589 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 KRT18P56-201ENST00000507275 550 ntBASIC19.81■□□□□ 0.76
PEX3P56589 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.81■□□□□ 0.76
PEX3P56589 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.81■□□□□ 0.76
PEX3P56589 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PEX3P56589 AL353801.3-201ENST00000609898 542 ntBASIC19.81■□□□□ 0.76
PEX3P56589 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.81■□□□□ 0.76
PEX3P56589 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.81■□□□□ 0.76
PEX3P56589 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PEX3P56589 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PEX3P56589 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PEX3P56589 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
PEX3P56589 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.8■□□□□ 0.76
PEX3P56589 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.8■□□□□ 0.76
PEX3P56589 VENTXP7-201ENST00000475503 772 ntBASIC19.8■□□□□ 0.76
PEX3P56589 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.8■□□□□ 0.76
PEX3P56589 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.8■□□□□ 0.76
PEX3P56589 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.8■□□□□ 0.76
PEX3P56589 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PEX3P56589 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 FLJ13224-201ENST00000313737 1514 ntBASIC19.8■□□□□ 0.76
PEX3P56589 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PEX3P56589 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.8■□□□□ 0.76
PEX3P56589 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PEX3P56589 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PEX3P56589 AC100803.2-201ENST00000562459 1963 ntBASIC19.79■□□□□ 0.76
PEX3P56589 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 AC246785.2-201ENST00000432512 513 ntBASIC19.79■□□□□ 0.76
PEX3P56589 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PEX3P56589 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.79■□□□□ 0.76
PEX3P56589 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.79■□□□□ 0.76
PEX3P56589 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PEX3P56589 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms