Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.38■□□□□ 0.53
CDH4P55283 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.37■□□□□ 0.53
CDH4P55283 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDH4P55283 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH4P55283 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH4P55283 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH4P55283 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH4P55283 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDH4P55283 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH4P55283 AP000997.3-201ENST00000623333 2250 ntBASIC18.37■□□□□ 0.53
CDH4P55283 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CDH4P55283 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 POM121L3P-201ENST00000419331 1163 ntBASIC18.37■□□□□ 0.53
CDH4P55283 FOSL1P1-201ENST00000511041 816 ntBASIC18.37■□□□□ 0.53
CDH4P55283 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.37■□□□□ 0.53
CDH4P55283 AC009533.2-201ENST00000543664 586 ntBASIC18.37■□□□□ 0.53
CDH4P55283 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.37■□□□□ 0.53
CDH4P55283 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH4P55283 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 KRT8P47-201ENST00000604727 1398 ntBASIC18.37■□□□□ 0.53
CDH4P55283 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
CDH4P55283 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.37■□□□□ 0.53
CDH4P55283 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 AC138028.4-201ENST00000564984 1845 ntBASIC18.37■□□□□ 0.53
CDH4P55283 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDH4P55283 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
CDH4P55283 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDH4P55283 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH4P55283 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH4P55283 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH4P55283 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.36■□□□□ 0.53
CDH4P55283 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH4P55283 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH4P55283 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH4P55283 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH4P55283 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH4P55283 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 BNIP3P18-201ENST00000593976 575 ntBASIC18.36■□□□□ 0.53
CDH4P55283 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH4P55283 AL121772.3-201ENST00000610840 674 ntBASIC18.36■□□□□ 0.53
CDH4P55283 AC097374.2-201ENST00000618617 1306 ntBASIC18.36■□□□□ 0.53
CDH4P55283 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH4P55283 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CDH4P55283 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH4P55283 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDH4P55283 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH4P55283 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH4P55283 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH4P55283 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH4P55283 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH4P55283 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH4P55283 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
CDH4P55283 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH4P55283 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH4P55283 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH4P55283 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH4P55283 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH4P55283 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CDH4P55283 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH4P55283 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms