Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 AC005082.1-201ENST00000413042 2259 ntBASIC13.19□□□□□ -0.3
APOC4P55056 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
APOC4P55056 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.19□□□□□ -0.3
APOC4P55056 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
APOC4P55056 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC13.19□□□□□ -0.3
APOC4P55056 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APOC4P55056 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC4P55056 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
APOC4P55056 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
APOC4P55056 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
APOC4P55056 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC4P55056 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.18□□□□□ -0.3
APOC4P55056 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.18□□□□□ -0.3
APOC4P55056 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.18□□□□□ -0.3
APOC4P55056 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 AL732292.2-201ENST00000609649 430 ntBASIC13.18□□□□□ -0.3
APOC4P55056 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.18□□□□□ -0.3
APOC4P55056 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC4P55056 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 AP000974.1-201ENST00000623909 2387 ntBASIC13.18□□□□□ -0.3
APOC4P55056 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.18□□□□□ -0.3
APOC4P55056 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.18□□□□□ -0.3
APOC4P55056 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
APOC4P55056 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
APOC4P55056 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.17□□□□□ -0.3
APOC4P55056 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.17□□□□□ -0.3
APOC4P55056 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.17□□□□□ -0.3
APOC4P55056 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC4P55056 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
APOC4P55056 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC4P55056 AL591684.3-201ENST00000605187 298 ntBASIC13.17□□□□□ -0.3
APOC4P55056 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC4P55056 AC114341.1-201ENST00000618070 349 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms