Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AL121894.2-201ENST00000602977 491 ntBASIC19.06■□□□□ 0.64
CACNA2D1P54289 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 AC009154.2-201ENST00000621177 724 ntBASIC19.06■□□□□ 0.64
CACNA2D1P54289 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 AC093010.1-201ENST00000473625 1624 ntBASIC19.06■□□□□ 0.64
CACNA2D1P54289 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 AL096828.2-201ENST00000567259 1965 ntBASIC19.06■□□□□ 0.64
CACNA2D1P54289 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CACNA2D1P54289 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CACNA2D1P54289 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.05■□□□□ 0.64
CACNA2D1P54289 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 UNC93B7-201ENST00000509439 705 ntBASIC19.05■□□□□ 0.64
CACNA2D1P54289 FOSL1P1-201ENST00000511041 816 ntBASIC19.05■□□□□ 0.64
CACNA2D1P54289 AC005336.2-201ENST00000593183 939 ntBASIC19.05■□□□□ 0.64
CACNA2D1P54289 AL732292.2-201ENST00000609649 430 ntBASIC19.05■□□□□ 0.64
CACNA2D1P54289 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CACNA2D1P54289 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CACNA2D1P54289 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 AL450487.1-201ENST00000426799 995 ntBASIC19.04■□□□□ 0.64
CACNA2D1P54289 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 MTCL1P1-201ENST00000446207 792 ntBASIC19.04■□□□□ 0.64
CACNA2D1P54289 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 AC011840.4-201ENST00000578471 627 ntBASIC19.04■□□□□ 0.64
CACNA2D1P54289 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 NSUN5P1-202ENST00000421140 1535 ntBASIC19.04■□□□□ 0.64
CACNA2D1P54289 NSUN5P2-203ENST00000457352 1529 ntBASIC19.04■□□□□ 0.64
CACNA2D1P54289 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CACNA2D1P54289 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CACNA2D1P54289 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CACNA2D1P54289 KRT18P65-201ENST00000439811 1286 ntBASIC19.03■□□□□ 0.64
CACNA2D1P54289 NUS1P1-201ENST00000446295 882 ntBASIC19.03■□□□□ 0.64
CACNA2D1P54289 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 AC104819.1-201ENST00000504587 486 ntBASIC19.03■□□□□ 0.64
CACNA2D1P54289 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.03■□□□□ 0.64
CACNA2D1P54289 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms