Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LHX1P48742 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LHX1P48742 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 AC020763.4-201ENST00000623414 4170 ntBASIC19.03■□□□□ 0.64
LHX1P48742 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.03■□□□□ 0.64
LHX1P48742 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.02■□□□□ 0.64
LHX1P48742 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.02■□□□□ 0.64
LHX1P48742 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.02■□□□□ 0.64
LHX1P48742 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.02■□□□□ 0.64
LHX1P48742 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.02■□□□□ 0.64
LHX1P48742 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.02■□□□□ 0.64
LHX1P48742 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.02■□□□□ 0.64
LHX1P48742 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LHX1P48742 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LHX1P48742 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.02■□□□□ 0.64
LHX1P48742 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 KRT8P47-201ENST00000604727 1398 ntBASIC19.02■□□□□ 0.64
LHX1P48742 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
LHX1P48742 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LHX1P48742 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LHX1P48742 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.02■□□□□ 0.63
LHX1P48742 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
LHX1P48742 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LHX1P48742 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
LHX1P48742 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX1P48742 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.01■□□□□ 0.63
LHX1P48742 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.01■□□□□ 0.63
LHX1P48742 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.01■□□□□ 0.63
LHX1P48742 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 INTS4P1-201ENST00000438455 1935 ntBASIC19.01■□□□□ 0.63
LHX1P48742 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LHX1P48742 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.01■□□□□ 0.63
LHX1P48742 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LHX1P48742 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
LHX1P48742 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19■□□□□ 0.63
LHX1P48742 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 HCG11-201ENST00000411553 5696 ntBASIC19■□□□□ 0.63
LHX1P48742 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
LHX1P48742 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LHX1P48742 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19■□□□□ 0.63
LHX1P48742 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19■□□□□ 0.63
LHX1P48742 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19■□□□□ 0.63
LHX1P48742 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19■□□□□ 0.63
LHX1P48742 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19■□□□□ 0.63
LHX1P48742 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19■□□□□ 0.63
LHX1P48742 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19■□□□□ 0.63
LHX1P48742 AL121894.2-201ENST00000602977 491 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms