Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A4P31645 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
SLC6A4P31645 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A4P31645 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A4P31645 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A4P31645 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 KRT16P4-201ENST00000453883 522 ntBASIC18.44■□□□□ 0.54
SLC6A4P31645 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC6A4P31645 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 MIR5100-201ENST00000579544 119 ntBASIC18.44■□□□□ 0.54
SLC6A4P31645 AL691432.3-201ENST00000621860 400 ntBASIC18.44■□□□□ 0.54
SLC6A4P31645 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A4P31645 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A4P31645 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SLC6A4P31645 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC6A4P31645 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC6A4P31645 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC6A4P31645 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SLC6A4P31645 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SLC6A4P31645 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 AKR1C7P-201ENST00000305623 895 ntBASIC18.43■□□□□ 0.54
SLC6A4P31645 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A4P31645 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A4P31645 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.43■□□□□ 0.54
SLC6A4P31645 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.43■□□□□ 0.54
SLC6A4P31645 AC009533.2-201ENST00000543664 586 ntBASIC18.43■□□□□ 0.54
SLC6A4P31645 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A4P31645 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A4P31645 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC6A4P31645 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC6A4P31645 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC6A4P31645 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A4P31645 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A4P31645 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
SLC6A4P31645 TPM4P1-201ENST00000436100 807 ntBASIC18.42■□□□□ 0.54
SLC6A4P31645 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A4P31645 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC6A4P31645 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A4P31645 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC6A4P31645 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC6A4P31645 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC6A4P31645 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC6A4P31645 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A4P31645 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC6A4P31645 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC6A4P31645 AC022898.2-201ENST00000616822 1312 ntBASIC18.42■□□□□ 0.54
SLC6A4P31645 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC6A4P31645 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A4P31645 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SLC6A4P31645 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms