Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EPHA3P29320 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA3P29320 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
EPHA3P29320 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
EPHA3P29320 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA3P29320 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA3P29320 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
EPHA3P29320 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.53■□□□□ 0.4
EPHA3P29320 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EPHA3P29320 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.53■□□□□ 0.4
EPHA3P29320 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.52■□□□□ 0.4
EPHA3P29320 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
EPHA3P29320 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.52■□□□□ 0.4
EPHA3P29320 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.52■□□□□ 0.4
EPHA3P29320 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
EPHA3P29320 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
EPHA3P29320 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.52■□□□□ 0.4
EPHA3P29320 NUDT16P1-203ENST00000513809 620 ntBASIC17.52■□□□□ 0.4
EPHA3P29320 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
EPHA3P29320 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.52■□□□□ 0.4
EPHA3P29320 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.52■□□□□ 0.4
EPHA3P29320 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 FAM197Y4-202ENST00000622692 608 ntBASIC17.52■□□□□ 0.4
EPHA3P29320 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
EPHA3P29320 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
EPHA3P29320 KRT8P7-201ENST00000533003 1432 ntBASIC17.52■□□□□ 0.4
EPHA3P29320 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.52■□□□□ 0.4
EPHA3P29320 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
EPHA3P29320 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EPHA3P29320 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EPHA3P29320 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EPHA3P29320 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
EPHA3P29320 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
EPHA3P29320 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
EPHA3P29320 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.52■□□□□ 0.39
EPHA3P29320 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
EPHA3P29320 AC133963.1-201ENST00000504166 1679 ntBASIC17.52■□□□□ 0.39
EPHA3P29320 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.51■□□□□ 0.39
EPHA3P29320 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.51■□□□□ 0.39
EPHA3P29320 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.51■□□□□ 0.39
EPHA3P29320 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
EPHA3P29320 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.51■□□□□ 0.39
EPHA3P29320 CRYGFP-201ENST00000418459 633 ntBASIC17.51■□□□□ 0.39
EPHA3P29320 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
EPHA3P29320 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.51■□□□□ 0.39
EPHA3P29320 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.51■□□□□ 0.39
EPHA3P29320 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.51■□□□□ 0.39
EPHA3P29320 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.51■□□□□ 0.39
EPHA3P29320 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.51■□□□□ 0.39
EPHA3P29320 MIR4651-201ENST00000582622 73 ntBASIC17.51■□□□□ 0.39
EPHA3P29320 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.51■□□□□ 0.39
EPHA3P29320 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 AL138688.1-201ENST00000624851 1594 ntBASIC17.51■□□□□ 0.39
EPHA3P29320 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
EPHA3P29320 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms