Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CDH3P22223 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH3P22223 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH3P22223 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH3P22223 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 AC011270.2-201ENST00000624293 2550 ntBASIC17.65■□□□□ 0.42
CDH3P22223 AC009053.2-201ENST00000563701 2365 ntBASIC17.65■□□□□ 0.42
CDH3P22223 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDH3P22223 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 HCG4P8-203ENST00000443049 980 ntBASIC17.65■□□□□ 0.42
CDH3P22223 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.65■□□□□ 0.42
CDH3P22223 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH3P22223 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CDH3P22223 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH3P22223 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH3P22223 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH3P22223 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDH3P22223 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDH3P22223 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CDH3P22223 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.64■□□□□ 0.42
CDH3P22223 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDH3P22223 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH3P22223 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH3P22223 TSPY22P-201ENST00000427496 604 ntBASIC17.64■□□□□ 0.41
CDH3P22223 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.64■□□□□ 0.41
CDH3P22223 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH3P22223 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH3P22223 KRT8P26-201ENST00000534154 1276 ntBASIC17.64■□□□□ 0.41
CDH3P22223 RNF126P1-202ENST00000569893 925 ntBASIC17.64■□□□□ 0.41
CDH3P22223 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.64■□□□□ 0.41
CDH3P22223 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
CDH3P22223 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH3P22223 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH3P22223 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CDH3P22223 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.64■□□□□ 0.41
CDH3P22223 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH3P22223 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH3P22223 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH3P22223 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 CROCCP3-202ENST00000420820 1947 ntBASIC17.63■□□□□ 0.41
CDH3P22223 Z83836.1-201ENST00000624605 1642 ntBASIC17.63■□□□□ 0.41
CDH3P22223 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH3P22223 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 TSSC2-201ENST00000450217 709 ntBASIC17.63■□□□□ 0.41
CDH3P22223 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CDH3P22223 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH3P22223 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH3P22223 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH3P22223 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH3P22223 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH3P22223 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH3P22223 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CDH3P22223 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.62■□□□□ 0.41
CDH3P22223 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH3P22223 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH3P22223 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH3P22223 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.62■□□□□ 0.41
CDH3P22223 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms