Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NCK1P16333 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
NCK1P16333 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NCK1P16333 MIR4674-201ENST00000582457 87 ntBASIC17.03■□□□□ 0.32
NCK1P16333 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 AC073195.1-201ENST00000607241 877 ntBASIC17.03■□□□□ 0.32
NCK1P16333 AC073648.6-201ENST00000641589 218 ntBASIC17.03■□□□□ 0.32
NCK1P16333 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.03■□□□□ 0.32
NCK1P16333 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.03■□□□□ 0.32
NCK1P16333 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCK1P16333 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.02■□□□□ 0.32
NCK1P16333 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.02■□□□□ 0.32
NCK1P16333 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.02■□□□□ 0.32
NCK1P16333 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NCK1P16333 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.02■□□□□ 0.32
NCK1P16333 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.02■□□□□ 0.32
NCK1P16333 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NCK1P16333 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NCK1P16333 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCK1P16333 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.02■□□□□ 0.32
NCK1P16333 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
NCK1P16333 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.02■□□□□ 0.32
NCK1P16333 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCK1P16333 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NCK1P16333 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCK1P16333 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCK1P16333 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NCK1P16333 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
NCK1P16333 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCK1P16333 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.02■□□□□ 0.31
NCK1P16333 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NCK1P16333 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NCK1P16333 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 FSCN1P1-201ENST00000568912 1481 ntBASIC17.01■□□□□ 0.31
NCK1P16333 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.01■□□□□ 0.31
NCK1P16333 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NCK1P16333 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 HLA-L-209ENST00000420110 1011 ntBASIC17.01■□□□□ 0.31
NCK1P16333 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.01■□□□□ 0.31
NCK1P16333 SLC25A1P4-201ENST00000567977 778 ntBASIC17.01■□□□□ 0.31
NCK1P16333 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCK1P16333 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.01■□□□□ 0.31
NCK1P16333 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NCK1P16333 UBALD1-205ENST00000590891 2641 ntBASIC17.01■□□□□ 0.31
NCK1P16333 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms