Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.87■■□□□ 1.09
COL11A2P13942 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.87■■□□□ 1.09
COL11A2P13942 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 AC091812.2-201ENST00000619081 385 ntBASIC21.87■■□□□ 1.09
COL11A2P13942 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.87■■□□□ 1.09
COL11A2P13942 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL11A2P13942 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL11A2P13942 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.86■■□□□ 1.09
COL11A2P13942 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.86■■□□□ 1.09
COL11A2P13942 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.86■■□□□ 1.09
COL11A2P13942 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
COL11A2P13942 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.86■■□□□ 1.09
COL11A2P13942 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.86■■□□□ 1.09
COL11A2P13942 PRSS29P-201ENST00000440800 595 ntBASIC21.86■■□□□ 1.09
COL11A2P13942 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL11A2P13942 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.86■■□□□ 1.09
COL11A2P13942 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 AC005332.7-201ENST00000614046 2005 ntBASIC21.86■■□□□ 1.09
COL11A2P13942 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.86■■□□□ 1.09
COL11A2P13942 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL11A2P13942 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 AC103564.2-201ENST00000432853 1299 ntBASIC21.86■■□□□ 1.09
COL11A2P13942 FAM58CP-201ENST00000435741 640 ntBASIC21.86■■□□□ 1.09
COL11A2P13942 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.86■■□□□ 1.09
COL11A2P13942 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
COL11A2P13942 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.86■■□□□ 1.09
COL11A2P13942 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.86■■□□□ 1.09
COL11A2P13942 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
COL11A2P13942 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.85■■□□□ 1.09
COL11A2P13942 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.85■■□□□ 1.09
COL11A2P13942 AC005498.2-205ENST00000593218 784 ntBASIC21.85■■□□□ 1.09
COL11A2P13942 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
COL11A2P13942 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL11A2P13942 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A2P13942 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.84■■□□□ 1.09
COL11A2P13942 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A2P13942 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.84■■□□□ 1.09
COL11A2P13942 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.84■■□□□ 1.09
COL11A2P13942 BCRP1-201ENST00000444246 691 ntBASIC21.84■■□□□ 1.09
COL11A2P13942 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.84■■□□□ 1.09
COL11A2P13942 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A2P13942 OR7E47P-204ENST00000575924 449 ntBASIC21.84■■□□□ 1.09
COL11A2P13942 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.84■■□□□ 1.09
COL11A2P13942 AC068137.2-201ENST00000605408 478 ntBASIC21.84■■□□□ 1.09
COL11A2P13942 AC004877.2-201ENST00000623941 599 ntBASIC21.84■■□□□ 1.09
COL11A2P13942 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A2P13942 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A2P13942 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A2P13942 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL11A2P13942 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.84■■□□□ 1.09
COL11A2P13942 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A2P13942 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A2P13942 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.83■■□□□ 1.09
COL11A2P13942 RHOQP3-201ENST00000437982 621 ntBASIC21.83■■□□□ 1.09
COL11A2P13942 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.83■■□□□ 1.09
COL11A2P13942 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.83■■□□□ 1.09
COL11A2P13942 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.83■■□□□ 1.09
COL11A2P13942 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
COL11A2P13942 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A2P13942 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A2P13942 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A2P13942 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL11A2P13942 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
COL11A2P13942 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
COL11A2P13942 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL11A2P13942 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.83■■□□□ 1.08
COL11A2P13942 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms