Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CCL4P13236 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL4P13236 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.93■□□□□ 0.3
CCL4P13236 PMPCAP1-201ENST00000508114 1576 ntBASIC16.93■□□□□ 0.3
CCL4P13236 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCL4P13236 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL4P13236 AC079776.2-201ENST00000641154 1609 ntBASIC16.92■□□□□ 0.3
CCL4P13236 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL4P13236 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL4P13236 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL4P13236 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCL4P13236 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCL4P13236 AC096633.1-201ENST00000422446 749 ntBASIC16.92■□□□□ 0.3
CCL4P13236 AL591424.1-201ENST00000442569 1213 ntBASIC16.92■□□□□ 0.3
CCL4P13236 AC092183.1-201ENST00000469884 875 ntBASIC16.92■□□□□ 0.3
CCL4P13236 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL4P13236 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL4P13236 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.92■□□□□ 0.3
CCL4P13236 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 AC055717.3-201ENST00000622967 595 ntBASIC16.92■□□□□ 0.3
CCL4P13236 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.92■□□□□ 0.3
CCL4P13236 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCL4P13236 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCL4P13236 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
CCL4P13236 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCL4P13236 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCL4P13236 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 KRT8P47-201ENST00000604727 1398 ntBASIC16.91■□□□□ 0.3
CCL4P13236 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.91■□□□□ 0.3
CCL4P13236 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCL4P13236 LAGE3P1-201ENST00000425356 484 ntBASIC16.91■□□□□ 0.3
CCL4P13236 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.91■□□□□ 0.3
CCL4P13236 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.91■□□□□ 0.3
CCL4P13236 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CCL4P13236 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.91■□□□□ 0.3
CCL4P13236 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.91■□□□□ 0.3
CCL4P13236 AL022326.1-202ENST00000641533 845 ntBASIC16.91■□□□□ 0.3
CCL4P13236 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCL4P13236 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCL4P13236 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCL4P13236 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 AC007967.2-201ENST00000432613 625 ntBASIC16.9■□□□□ 0.3
CCL4P13236 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL4P13236 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCL4P13236 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL4P13236 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL4P13236 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCL4P13236 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms