Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.71■□□□□ 0.91
BMP3P12645 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.71■□□□□ 0.91
BMP3P12645 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.71■□□□□ 0.91
BMP3P12645 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.71■□□□□ 0.91
BMP3P12645 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.71■□□□□ 0.91
BMP3P12645 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.71■□□□□ 0.91
BMP3P12645 AF186996.4-201ENST00000467186 377 ntBASIC20.71■□□□□ 0.91
BMP3P12645 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 RNA5SP419-201ENST00000515908 135 ntBASIC20.71■□□□□ 0.91
BMP3P12645 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.71■□□□□ 0.91
BMP3P12645 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.71■□□□□ 0.91
BMP3P12645 AC148477.8-201ENST00000624298 468 ntBASIC20.71■□□□□ 0.91
BMP3P12645 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.71■□□□□ 0.91
BMP3P12645 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 AC010460.3-201ENST00000511359 1579 ntBASIC20.71■□□□□ 0.91
BMP3P12645 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BMP3P12645 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
BMP3P12645 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
BMP3P12645 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
BMP3P12645 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.7■□□□□ 0.9
BMP3P12645 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.7■□□□□ 0.9
BMP3P12645 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.7■□□□□ 0.9
BMP3P12645 AP001005.1-201ENST00000571755 1248 ntBASIC20.7■□□□□ 0.9
BMP3P12645 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.7■□□□□ 0.9
BMP3P12645 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.7■□□□□ 0.9
BMP3P12645 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BMP3P12645 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
BMP3P12645 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.7■□□□□ 0.9
BMP3P12645 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BMP3P12645 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.69■□□□□ 0.9
BMP3P12645 AC004408.2-201ENST00000623613 2777 ntBASIC20.69■□□□□ 0.9
BMP3P12645 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.69■□□□□ 0.9
BMP3P12645 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
BMP3P12645 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 SCARNA2-201ENST00000458748 420 ntBASIC20.69■□□□□ 0.9
BMP3P12645 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.69■□□□□ 0.9
BMP3P12645 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
BMP3P12645 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
BMP3P12645 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
BMP3P12645 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.69■□□□□ 0.9
BMP3P12645 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.69■□□□□ 0.9
BMP3P12645 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BMP3P12645 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
BMP3P12645 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.68■□□□□ 0.9
BMP3P12645 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BMP3P12645 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BMP3P12645 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP3P12645 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP3P12645 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP3P12645 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.68■□□□□ 0.9
BMP3P12645 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP3P12645 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.68■□□□□ 0.9
BMP3P12645 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BMP3P12645 AL031284.1-201ENST00000419297 478 ntBASIC20.68■□□□□ 0.9
BMP3P12645 AC018712.1-201ENST00000455767 687 ntBASIC20.68■□□□□ 0.9
BMP3P12645 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.68■□□□□ 0.9
BMP3P12645 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.68■□□□□ 0.9
BMP3P12645 RNPS1P1-201ENST00000507437 918 ntBASIC20.68■□□□□ 0.9
BMP3P12645 AC073648.2-201ENST00000510116 352 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms