Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC31.28■■■□□ 2.6
TOP2AP11388 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TOP2AP11388 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC31.28■■■□□ 2.6
TOP2AP11388 PRSS29P-201ENST00000440800 595 ntBASIC31.28■■■□□ 2.6
TOP2AP11388 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC31.28■■■□□ 2.6
TOP2AP11388 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
TOP2AP11388 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC31.28■■■□□ 2.6
TOP2AP11388 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC31.28■■■□□ 2.6
TOP2AP11388 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC31.28■■■□□ 2.6
TOP2AP11388 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
TOP2AP11388 AC073592.3-201ENST00000625118 1834 ntBASIC31.27■■■□□ 2.6
TOP2AP11388 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TOP2AP11388 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TOP2AP11388 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TOP2AP11388 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC31.27■■■□□ 2.6
TOP2AP11388 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TOP2AP11388 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC31.27■■■□□ 2.6
TOP2AP11388 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC31.27■■■□□ 2.6
TOP2AP11388 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TOP2AP11388 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC31.27■■■□□ 2.6
TOP2AP11388 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC31.27■■■□□ 2.6
TOP2AP11388 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TOP2AP11388 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
TOP2AP11388 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
TOP2AP11388 KRT18P28-201ENST00000453838 1332 ntBASIC31.26■■■□□ 2.6
TOP2AP11388 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TOP2AP11388 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC31.26■■■□□ 2.59
TOP2AP11388 VN2R19P-201ENST00000442399 1052 ntBASIC31.26■■■□□ 2.59
TOP2AP11388 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC31.26■■■□□ 2.59
TOP2AP11388 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC31.26■■■□□ 2.59
TOP2AP11388 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC31.26■■■□□ 2.59
TOP2AP11388 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC31.26■■■□□ 2.59
TOP2AP11388 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TOP2AP11388 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC31.25■■■□□ 2.59
TOP2AP11388 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC31.25■■■□□ 2.59
TOP2AP11388 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TOP2AP11388 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC31.25■■■□□ 2.59
TOP2AP11388 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
TOP2AP11388 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC31.25■■■□□ 2.59
TOP2AP11388 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TOP2AP11388 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
TOP2AP11388 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC31.25■■■□□ 2.59
TOP2AP11388 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TOP2AP11388 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC31.25■■■□□ 2.59
TOP2AP11388 MAL2-202ENST00000531508 892 ntTSL 3 BASIC31.24■■■□□ 2.59
TOP2AP11388 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC31.24■■■□□ 2.59
TOP2AP11388 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TOP2AP11388 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC31.24■■■□□ 2.59
TOP2AP11388 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TOP2AP11388 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TOP2AP11388 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
TOP2AP11388 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC31.24■■■□□ 2.59
TOP2AP11388 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC31.24■■■□□ 2.59
TOP2AP11388 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TOP2AP11388 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TOP2AP11388 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
TOP2AP11388 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TOP2AP11388 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC31.24■■■□□ 2.59
TOP2AP11388 METTL26-205ENST00000397666 726 ntTSL 2 BASIC31.24■■■□□ 2.59
TOP2AP11388 NKTR-203ENST00000442970 646 ntTSL 2 BASIC31.24■■■□□ 2.59
TOP2AP11388 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC31.24■■■□□ 2.59
TOP2AP11388 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC31.24■■■□□ 2.59
TOP2AP11388 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC31.24■■■□□ 2.59
TOP2AP11388 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TOP2AP11388 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TOP2AP11388 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
TOP2AP11388 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TOP2AP11388 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
TOP2AP11388 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC31.23■■■□□ 2.59
TOP2AP11388 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
TOP2AP11388 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC31.23■■■□□ 2.59
TOP2AP11388 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC31.23■■■□□ 2.59
TOP2AP11388 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC31.23■■■□□ 2.59
TOP2AP11388 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TOP2AP11388 OR7E47P-204ENST00000575924 449 ntBASIC31.23■■■□□ 2.59
TOP2AP11388 STK25P1-201ENST00000585406 838 ntBASIC31.23■■■□□ 2.59
TOP2AP11388 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC31.23■■■□□ 2.59
TOP2AP11388 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC31.23■■■□□ 2.59
TOP2AP11388 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TOP2AP11388 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC31.22■■■□□ 2.59
TOP2AP11388 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TOP2AP11388 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC31.22■■■□□ 2.59
TOP2AP11388 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
TOP2AP11388 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TOP2AP11388 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TOP2AP11388 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TOP2AP11388 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
TOP2AP11388 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC31.22■■■□□ 2.59
TOP2AP11388 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC31.22■■■□□ 2.59
TOP2AP11388 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
TOP2AP11388 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC31.22■■■□□ 2.59
TOP2AP11388 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC31.22■■■□□ 2.59
TOP2AP11388 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
TOP2AP11388 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC31.22■■■□□ 2.59
TOP2AP11388 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
TOP2AP11388 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TOP2AP11388 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
TOP2AP11388 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TOP2AP11388 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TOP2AP11388 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms