Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBCP0CG48 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
UBCP0CG48 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
UBCP0CG48 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
UBCP0CG48 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.81■□□□□ 0.12
UBCP0CG48 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.81■□□□□ 0.12
UBCP0CG48 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.81■□□□□ 0.12
UBCP0CG48 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBCP0CG48 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.81■□□□□ 0.12
UBCP0CG48 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBCP0CG48 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBCP0CG48 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBCP0CG48 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.8■□□□□ 0.12
UBCP0CG48 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.8■□□□□ 0.12
UBCP0CG48 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBCP0CG48 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 RBM17P1-201ENST00000453646 1190 ntBASIC15.8■□□□□ 0.12
UBCP0CG48 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBCP0CG48 AC008687.5-201ENST00000593746 558 ntBASIC15.8■□□□□ 0.12
UBCP0CG48 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.8■□□□□ 0.12
UBCP0CG48 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBCP0CG48 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.8■□□□□ 0.12
UBCP0CG48 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.8■□□□□ 0.12
UBCP0CG48 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBCP0CG48 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.79■□□□□ 0.12
UBCP0CG48 AL139384.1-201ENST00000612143 3047 ntBASIC15.79■□□□□ 0.12
UBCP0CG48 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
UBCP0CG48 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
UBCP0CG48 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.79■□□□□ 0.12
UBCP0CG48 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.79■□□□□ 0.12
UBCP0CG48 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
UBCP0CG48 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.79■□□□□ 0.12
UBCP0CG48 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.79■□□□□ 0.12
UBCP0CG48 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.79■□□□□ 0.12
UBCP0CG48 MIR4785-201ENST00000585005 73 ntBASIC15.79■□□□□ 0.12
UBCP0CG48 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.79■□□□□ 0.12
UBCP0CG48 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.79■□□□□ 0.12
UBCP0CG48 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.79■□□□□ 0.12
UBCP0CG48 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBCP0CG48 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms