Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CYP3A4P08684 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CYP3A4P08684 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.2■□□□□ 0.82
CYP3A4P08684 COX5BP2-201ENST00000392354 334 ntBASIC20.2■□□□□ 0.82
CYP3A4P08684 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.2■□□□□ 0.82
CYP3A4P08684 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.2■□□□□ 0.82
CYP3A4P08684 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 AC116407.2-201ENST00000613639 860 ntBASIC20.2■□□□□ 0.82
CYP3A4P08684 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.2■□□□□ 0.82
CYP3A4P08684 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CYP3A4P08684 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CYP3A4P08684 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CYP3A4P08684 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP3A4P08684 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.19■□□□□ 0.82
CYP3A4P08684 FAM220CP-201ENST00000395253 831 ntBASIC20.19■□□□□ 0.82
CYP3A4P08684 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP3A4P08684 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.19■□□□□ 0.82
CYP3A4P08684 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP3A4P08684 DDX43P3-201ENST00000441064 443 ntBASIC20.19■□□□□ 0.82
CYP3A4P08684 AC122714.2-201ENST00000502787 707 ntBASIC20.19■□□□□ 0.82
CYP3A4P08684 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CYP3A4P08684 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.19■□□□□ 0.82
CYP3A4P08684 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP3A4P08684 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP3A4P08684 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP3A4P08684 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CYP3A4P08684 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.18■□□□□ 0.82
CYP3A4P08684 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.18■□□□□ 0.82
CYP3A4P08684 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP3A4P08684 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP3A4P08684 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP3A4P08684 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms