Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.55■■□□□ 1.36
COL5A2P05997 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.55■■□□□ 1.36
COL5A2P05997 LHX6-205ENST00000464484 666 ntTSL 2 BASIC23.55■■□□□ 1.36
COL5A2P05997 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.55■■□□□ 1.36
COL5A2P05997 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC23.55■■□□□ 1.36
COL5A2P05997 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC23.55■■□□□ 1.36
COL5A2P05997 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.55■■□□□ 1.36
COL5A2P05997 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL5A2P05997 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL5A2P05997 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL5A2P05997 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.54■■□□□ 1.36
COL5A2P05997 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC23.54■■□□□ 1.36
COL5A2P05997 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.54■■□□□ 1.36
COL5A2P05997 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
COL5A2P05997 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL5A2P05997 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL5A2P05997 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.54■■□□□ 1.36
COL5A2P05997 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC23.54■■□□□ 1.36
COL5A2P05997 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC23.54■■□□□ 1.36
COL5A2P05997 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.54■■□□□ 1.36
COL5A2P05997 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC23.54■■□□□ 1.36
COL5A2P05997 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.54■■□□□ 1.36
COL5A2P05997 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC23.54■■□□□ 1.36
COL5A2P05997 CD63-210ENST00000550776 870 ntTSL 5 BASIC23.54■■□□□ 1.36
COL5A2P05997 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC23.54■■□□□ 1.36
COL5A2P05997 OR7E47P-204ENST00000575924 449 ntBASIC23.54■■□□□ 1.36
COL5A2P05997 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC23.54■■□□□ 1.36
COL5A2P05997 AC019129.2-201ENST00000609837 1235 ntBASIC23.54■■□□□ 1.36
COL5A2P05997 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.54■■□□□ 1.36
COL5A2P05997 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL5A2P05997 AC005332.7-201ENST00000614046 2005 ntBASIC23.53■■□□□ 1.36
COL5A2P05997 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL5A2P05997 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL5A2P05997 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.53■■□□□ 1.36
COL5A2P05997 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.53■■□□□ 1.36
COL5A2P05997 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.53■■□□□ 1.36
COL5A2P05997 MRPL20P1-201ENST00000400819 433 ntBASIC23.53■■□□□ 1.36
COL5A2P05997 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC23.53■■□□□ 1.36
COL5A2P05997 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.53■■□□□ 1.36
COL5A2P05997 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC23.53■■□□□ 1.36
COL5A2P05997 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL5A2P05997 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC23.53■■□□□ 1.36
COL5A2P05997 METTL23-205ENST00000588302 925 ntTSL 5 BASIC23.53■■□□□ 1.36
COL5A2P05997 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.53■■□□□ 1.36
COL5A2P05997 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL5A2P05997 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL5A2P05997 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
COL5A2P05997 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL5A2P05997 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL5A2P05997 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL5A2P05997 CLDN5-201ENST00000403084 2357 ntBASIC23.52■■□□□ 1.36
COL5A2P05997 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL5A2P05997 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL5A2P05997 BCRP1-201ENST00000444246 691 ntBASIC23.52■■□□□ 1.36
COL5A2P05997 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC23.52■■□□□ 1.36
COL5A2P05997 AC004877.2-201ENST00000623941 599 ntBASIC23.52■■□□□ 1.36
COL5A2P05997 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL5A2P05997 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL5A2P05997 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC23.52■■□□□ 1.36
COL5A2P05997 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL5A2P05997 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
COL5A2P05997 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 AC003669.1-201ENST00000334569 611 ntBASIC23.51■■□□□ 1.35
COL5A2P05997 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
COL5A2P05997 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
COL5A2P05997 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC23.51■■□□□ 1.35
COL5A2P05997 RHOQP3-201ENST00000437982 621 ntBASIC23.51■■□□□ 1.35
COL5A2P05997 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC23.51■■□□□ 1.35
COL5A2P05997 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.51■■□□□ 1.35
COL5A2P05997 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL5A2P05997 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL5A2P05997 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.51■■□□□ 1.35
COL5A2P05997 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL5A2P05997 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL5A2P05997 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
COL5A2P05997 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL5A2P05997 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COL5A2P05997 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
COL5A2P05997 FAM58CP-201ENST00000435741 640 ntBASIC23.5■■□□□ 1.35
COL5A2P05997 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COL5A2P05997 AC091812.2-201ENST00000619081 385 ntBASIC23.5■■□□□ 1.35
COL5A2P05997 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.5■■□□□ 1.35
COL5A2P05997 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.5■■□□□ 1.35
COL5A2P05997 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms